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1.
An early cell shape transition drives evolutionary expansion of the human forebrain.
Cell
; 184(8): 2084-2102.e19, 2021 04 15.
Article
in English
| MEDLINE | ID: mdl-33765444
2.
Hybrid Epigenomes Reveal Extensive Local Genetic Changes to Chromatin Accessibility Contribute to Divergence in Embryonic Gene Expression Between Species.
Mol Biol Evol
; 40(11)2023 Nov 03.
Article
in English
| MEDLINE | ID: mdl-37823438
3.
Developmental single-cell transcriptomics in the Lytechinus variegatus sea urchin embryo.
Development
; 148(19)2021 10 01.
Article
in English
| MEDLINE | ID: mdl-34463740
4.
Genomic insights into Plasmodium vivax population structure and diversity in central Africa.
Malar J
; 23(1): 27, 2024 Jan 18.
Article
in English
| MEDLINE | ID: mdl-38238806
5.
Microbiome reduction and endosymbiont gain from a switch in sea urchin life history.
Proc Natl Acad Sci U S A
; 118(16)2021 04 20.
Article
in English
| MEDLINE | ID: mdl-33853946
6.
Evolutionary Changes in the Chromatin Landscape Contribute to Reorganization of a Developmental Gene Network During Rapid Life History Evolution in Sea Urchins.
Mol Biol Evol
; 39(9)2022 09 01.
Article
in English
| MEDLINE | ID: mdl-35946348
7.
The hard clam genome reveals massive expansion and diversification of inhibitors of apoptosis in Bivalvia.
BMC Biol
; 19(1): 15, 2021 01 25.
Article
in English
| MEDLINE | ID: mdl-33487168
8.
TBX5-encoded T-box transcription factor 5 variant T223M is associated with long QT syndrome and pediatric sudden cardiac death.
Am J Med Genet A
; 185(3): 923-929, 2021 03.
Article
in English
| MEDLINE | ID: mdl-33369127
9.
Identifying branch-specific positive selection throughout the regulatory genome using an appropriate proxy neutral.
BMC Genomics
; 21(1): 359, 2020 May 13.
Article
in English
| MEDLINE | ID: mdl-32404186
10.
Ocean acidification induces distinct transcriptomic responses across life history stages of the sea urchin Heliocidaris erythrogramma.
Mol Ecol
; 29(23): 4618-4636, 2020 12.
Article
in English
| MEDLINE | ID: mdl-33002253
11.
A comparative analysis of egg provisioning using mass spectrometry during rapid life history evolution in sea urchins.
Evol Dev
; 21(4): 188-204, 2019 07.
Article
in English
| MEDLINE | ID: mdl-31102332
12.
Comparative Developmental Transcriptomics Reveals Rewiring of a Highly Conserved Gene Regulatory Network during a Major Life History Switch in the Sea Urchin Genus Heliocidaris.
PLoS Biol
; 14(3): e1002391, 2016 Mar.
Article
in English
| MEDLINE | ID: mdl-26943850
13.
Expression of genes and proteins of the pax-six-eya-dach network in the metamorphic sea urchin: Insights into development of the enigmatic echinoderm body plan and sensory structures.
Dev Dyn
; 247(1): 239-249, 2018 01.
Article
in English
| MEDLINE | ID: mdl-28850769
14.
Nodal and BMP expression during the transition to pentamery in the sea urchin Heliocidaris erythrogramma: insights into patterning the enigmatic echinoderm body plan.
BMC Dev Biol
; 17(1): 4, 2017 02 13.
Article
in English
| MEDLINE | ID: mdl-28193178
15.
Gene expression and adaptive noncoding changes during human evolution.
BMC Genomics
; 18(1): 435, 2017 06 05.
Article
in English
| MEDLINE | ID: mdl-28583075
16.
The phylogeny of extant starfish (Asteroidea: Echinodermata) including Xyloplax, based on comparative transcriptomics.
Mol Phylogenet Evol
; 115: 161-170, 2017 10.
Article
in English
| MEDLINE | ID: mdl-28757447
17.
EchinoDB, an application for comparative transcriptomics of deeply-sampled clades of echinoderms.
BMC Bioinformatics
; 17: 48, 2016 Jan 22.
Article
in English
| MEDLINE | ID: mdl-26800861
18.
The impact of gene expression variation on the robustness and evolvability of a developmental gene regulatory network.
PLoS Biol
; 11(10): e1001696, 2013 Oct.
Article
in English
| MEDLINE | ID: mdl-24204211
19.
Analysis of synaptic gene expression in the neocortex of primates reveals evolutionary changes in glutamatergic neurotransmission.
Cereb Cortex
; 25(6): 1596-607, 2015 Jun.
Article
in English
| MEDLINE | ID: mdl-24408959
20.
Promoter regions of many neural- and nutrition-related genes have experienced positive selection during human evolution.
Nat Genet
; 39(9): 1140-4, 2007 Sep.
Article
in English
| MEDLINE | ID: mdl-17694055